Changes between Initial Version and Version 1 of Ticket #11207
- Timestamp:
- Jun 17, 2013, 3:02:03 PM (11 years ago)
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Ticket #11207
- Property Status new → closed
- Property Resolution → invalid
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Ticket #11207 – Description
initial v1 1 Using Seqan v. 1.4, I was trying to open a FASTQ file with SequenceStreamusing this pseudocode:2 1 Using Seqan v. 1.4, I was trying to open a FASTQ file with `SequenceStream` using this pseudocode: 2 {{{#!cpp 3 3 #include <seqan/sequence.h> 4 4 #include <seqan/seq_io.h> … … 42 42 cout << endl; 43 43 } 44 44 }}} 45 45 But I end up with this output message: 46 46 {{{ 47 47 error reading file reads.fastq 48 48 ERROR: Could not read from FASTA file 49 50 The return statements are canceled to display all error messages. Obviously, there is something that makes SequenceStreambelieve that I want to open a FASTA file. But on the example page http://trac.seqan.de/wiki/Tutorial/BasicSequenceIO, there are files ending with .fq indicating that FASTQ files should work too.49 }}} 50 The return statements are canceled to display all error messages. Obviously, there is something that makes `SequenceStream` believe that I want to open a FASTA file. But on the example page http://trac.seqan.de/wiki/Tutorial/BasicSequenceIO, there are files ending with .fq indicating that FASTQ files should work too.